Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Gm14822-201ENSMUST00000122247 291 ntBASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Gm27494-201ENSMUST00000184735 189 ntBASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Gm44492-201ENSMUST00000197012 141 ntBASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc12Q8K5B8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc12Q8K5B8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Gm26308-201ENSMUST00000157768 69 ntBASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Gm17968-201ENSMUST00000194902 784 ntBASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Gm45747-201ENSMUST00000212203 999 ntBASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Chchd1-203ENSMUST00000224633 557 ntBASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms