Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx54Q8K4L0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Gm27839-201ENSMUST00000184242 106 ntBASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 AC159896.2-201ENSMUST00000214753 269 ntBASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 AC154319.1-201ENSMUST00000216330 312 ntBASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 AL589735.1-201ENSMUST00000224353 270 ntBASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Gm5356-201ENSMUST00000093326 615 ntBASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.47■□□□□ 0.71
Ddx54Q8K4L0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx54Q8K4L0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm12341-201ENSMUST00000119724 503 ntBASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm8062-201ENSMUST00000139696 444 ntBASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm10478-201ENSMUST00000084451 396 ntBASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx54Q8K4L0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Mir692-1-201ENSMUST00000102263 109 ntBASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 AC154171.1-201ENSMUST00000224610 643 ntBASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx54Q8K4L0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx54Q8K4L0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx54Q8K4L0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx54Q8K4L0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx54Q8K4L0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx54Q8K4L0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx54Q8K4L0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms