Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Acot6-202ENSMUST00000222921 3622 ntBASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Mir6982-201ENSMUST00000184354 68 ntBASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf4Q8K4J2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Mir7071-201ENSMUST00000184847 69 ntBASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf4Q8K4J2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.23
Ebf4Q8K4J2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ebf4Q8K4J2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms