Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.15□□□□□ -0.14
Clrn1Q8K445 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clrn1Q8K445 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.15□□□□□ -0.15
Clrn1Q8K445 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Clrn1Q8K445 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.14□□□□□ -0.15
Clrn1Q8K445 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.14□□□□□ -0.15
Clrn1Q8K445 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn1Q8K445 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.13□□□□□ -0.15
Clrn1Q8K445 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.13□□□□□ -0.15
Clrn1Q8K445 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.13□□□□□ -0.15
Clrn1Q8K445 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn1Q8K445 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.13□□□□□ -0.15
Clrn1Q8K445 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn1Q8K445 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.12□□□□□ -0.15
Clrn1Q8K445 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.12□□□□□ -0.15
Clrn1Q8K445 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.12□□□□□ -0.15
Clrn1Q8K445 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn1Q8K445 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Clrn1Q8K445 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clrn1Q8K445 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms