Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.44□□□□□ -0.9
Cystm1Q8K353 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Gm11860-201ENSMUST00000122346 1010 ntBASIC9.44□□□□□ -0.9
Cystm1Q8K353 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.43□□□□□ -0.9
Cystm1Q8K353 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.43□□□□□ -0.9
Cystm1Q8K353 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gm18669-201ENSMUST00000216049 778 ntBASIC9.43□□□□□ -0.9
Cystm1Q8K353 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.43□□□□□ -0.9
Cystm1Q8K353 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms