Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm27335-201ENSMUST00000184758 97 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm18206-201ENSMUST00000207027 926 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 AW822252-206ENSMUST00000208904 237 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm5364-201ENSMUST00000216789 889 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfwd3Q8CIK8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gm43514-201ENSMUST00000198852 424 ntBASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfwd3Q8CIK8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfwd3Q8CIK8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfwd3Q8CIK8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfwd3Q8CIK8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfwd3Q8CIK8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfwd3Q8CIK8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfwd3Q8CIK8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms