Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm25745-201ENSMUST00000174945 133 ntBASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Olfr129-201ENSMUST00000122318 993 ntBASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lysmd4Q8CC84 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gm13836-201ENSMUST00000121159 501 ntBASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gm6659-201ENSMUST00000174752 547 ntBASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gm43767-201ENSMUST00000198933 381 ntBASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lysmd4Q8CC84 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms