Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Gm2451-201ENSMUST00000199447 999 ntBASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Gm10290-201ENSMUST00000200451 999 ntBASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm2810-201ENSMUST00000118681 990 ntBASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm11543-201ENSMUST00000120758 370 ntBASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm18737-201ENSMUST00000173594 937 ntBASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Mir6990-201ENSMUST00000183724 91 ntBASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Olfr286-202ENSMUST00000205305 969 ntBASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.44■□□□□ 0.38
Alx1Q8C8B0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gm5479-201ENSMUST00000160578 435 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gm44335-201ENSMUST00000196879 141 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gm44297-201ENSMUST00000198304 141 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gm44346-201ENSMUST00000198851 141 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gm5867-201ENSMUST00000063197 592 ntBASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Alx1Q8C8B0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Alx1Q8C8B0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms