Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Mir6404-201ENSMUST00000183699 94 ntBASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Gm28659-201ENSMUST00000188013 759 ntBASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.37□□□□□ -0.27
Rft1Q8C3B8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rft1Q8C3B8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms