Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Gm5364-201ENSMUST00000216789 889 ntBASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4Q8BQZ5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gm14722-201ENSMUST00000118943 689 ntBASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.53□□□□□ -0.08
Cpsf4Q8BQZ5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4Q8BQZ5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4Q8BQZ5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4Q8BQZ5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms