Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Gm10175-201ENSMUST00000086013 645 ntBASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab11fip4Q8BQP8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Gm17271-201ENSMUST00000165535 355 ntBASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Gm4899-201ENSMUST00000178708 719 ntBASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Gm8318-201ENSMUST00000182954 872 ntBASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rab11fip4Q8BQP8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm14722-201ENSMUST00000118943 689 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm25911-201ENSMUST00000157621 56 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm27300-201ENSMUST00000184085 97 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm27335-201ENSMUST00000184758 97 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.59■□□□□ 0.25
Rab11fip4Q8BQP8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab11fip4Q8BQP8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab11fip4Q8BQP8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms