Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ckap4Q8BMK4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ckap4Q8BMK4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ckap4Q8BMK4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ckap4Q8BMK4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.21□□□□□ -0.14
Ckap4Q8BMK4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ckap4Q8BMK4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Gm19164-201ENSMUST00000210667 640 ntBASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ckap4Q8BMK4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.19□□□□□ -0.14
Ckap4Q8BMK4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ckap4Q8BMK4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms