Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.29□□□□□ -0.12
Prpf18Q8BM39 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Gm33142-201ENSMUST00000193913 867 ntBASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf18Q8BM39 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf18Q8BM39 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Gm7284-201ENSMUST00000131667 944 ntBASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf18Q8BM39 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf18Q8BM39 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms