Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csnk1a1Q8BK63 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Csnk1a1Q8BK63 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Csnk1a1Q8BK63 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Csnk1a1Q8BK63 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.33□□□□□ -0.27
Csnk1a1Q8BK63 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Csnk1a1Q8BK63 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Csnk1a1Q8BK63 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csnk1a1Q8BK63 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csnk1a1Q8BK63 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.31□□□□□ -0.28
Csnk1a1Q8BK63 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms