Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Gm15358-201ENSMUST00000119249 520 ntBASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp2bQ8BJF9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Celf4-206ENSMUST00000224553 1729 ntBASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp2bQ8BJF9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2bQ8BJF9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms