Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm8344-201ENSMUST00000119813 856 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Gm15173-201ENSMUST00000122049 433 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Gm6443-201ENSMUST00000203599 874 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Gm7222-201ENSMUST00000117512 906 ntBASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh20Q8BIZ0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Mir5126-201ENSMUST00000175513 77 ntBASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh20Q8BIZ0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh20Q8BIZ0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms