Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atg4bQ8BGE6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Gm12008-201ENSMUST00000117791 755 ntBASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Gm18206-201ENSMUST00000207027 926 ntBASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4bQ8BGE6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms