Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.29■□□□□ 0.36
Prpf40bQ80W14 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf40bQ80W14 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Gm9385-201ENSMUST00000117563 472 ntBASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Gm18057-201ENSMUST00000208220 503 ntBASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf40bQ80W14 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Gm13223-201ENSMUST00000118609 747 ntBASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Gm19164-201ENSMUST00000210667 640 ntBASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Gm18246-201ENSMUST00000221023 728 ntBASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.27■□□□□ 0.36
Prpf40bQ80W14 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms