Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otop1Q80VM9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Otop1Q80VM9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otop1Q80VM9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.41□□□□□ -0.1
Otop1Q80VM9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Otop1Q80VM9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otop1Q80VM9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.11
Otop1Q80VM9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.39□□□□□ -0.11
Otop1Q80VM9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.39□□□□□ -0.11
Otop1Q80VM9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.39□□□□□ -0.11
Otop1Q80VM9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.39□□□□□ -0.11
Otop1Q80VM9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Otop1Q80VM9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Gm8410-201ENSMUST00000117225 605 ntBASIC14.38□□□□□ -0.11
Otop1Q80VM9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.38□□□□□ -0.11
Otop1Q80VM9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Mir7684-201ENSMUST00000183858 60 ntBASIC14.38□□□□□ -0.11
Otop1Q80VM9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otop1Q80VM9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms