Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh19Q80TF3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Gm43474-201ENSMUST00000196415 774 ntBASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Gm43767-201ENSMUST00000198933 381 ntBASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh19Q80TF3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms