Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Gm10154-201ENSMUST00000084445 354 ntBASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh8Q7TSK3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Gm16198-201ENSMUST00000118766 670 ntBASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Gm2272-201ENSMUST00000194903 582 ntBASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh8Q7TSK3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Pcdh8Q7TSK3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm5312-201ENSMUST00000203728 547 ntBASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm20553-201ENSMUST00000204205 844 ntBASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.75□□□□□ -0.05
Pcdh8Q7TSK3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms