Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Sh3d21Q7TSG5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3d21Q7TSG5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sh3d21Q7TSG5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3d21Q7TSG5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3d21Q7TSG5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.37■□□□□ 0.21
Sh3d21Q7TSG5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms