Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Gm8344-201ENSMUST00000119813 856 ntBASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx4Q7TNK1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfx4Q7TNK1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms