Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Gm18733-201ENSMUST00000173950 856 ntBASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac4Q6NZM9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Carlr-201ENSMUST00000181515 2574 ntBASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac4Q6NZM9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac4Q6NZM9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms