Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf6Q6NVF9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf6Q6NVF9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf6Q6NVF9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms