Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Sdc3Q64519 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.41□□□□□ -0.1
Sdc3Q64519 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Gm23935-201ENSMUST00000102303 57 ntBASIC14.41□□□□□ -0.1
Sdc3Q64519 Gm24270-201ENSMUST00000102326 57 ntBASIC14.41□□□□□ -0.1
Sdc3Q64519 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Gm24245-201ENSMUST00000157318 57 ntBASIC14.41□□□□□ -0.1
Sdc3Q64519 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc3Q64519 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.41□□□□□ -0.1
Sdc3Q64519 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sdc3Q64519 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sdc3Q64519 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sdc3Q64519 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Gm14722-201ENSMUST00000118943 689 ntBASIC14.4□□□□□ -0.1
Sdc3Q64519 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.4□□□□□ -0.1
Sdc3Q64519 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.4□□□□□ -0.1
Sdc3Q64519 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.4□□□□□ -0.1
Sdc3Q64519 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.4□□□□□ -0.1
Sdc3Q64519 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sdc3Q64519 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Sdc3Q64519 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.39□□□□□ -0.11
Sdc3Q64519 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Gm5177-201ENSMUST00000183092 997 ntBASIC14.39□□□□□ -0.11
Sdc3Q64519 Gm45747-201ENSMUST00000212203 999 ntBASIC14.39□□□□□ -0.11
Sdc3Q64519 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.39□□□□□ -0.11
Sdc3Q64519 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms