Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clcn1Q64347 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.93■□□□□ 0.62
Clcn1Q64347 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.93■□□□□ 0.62
Clcn1Q64347 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.93■□□□□ 0.62
Clcn1Q64347 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.93■□□□□ 0.62
Clcn1Q64347 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.93■□□□□ 0.62
Clcn1Q64347 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Clcn1Q64347 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn1Q64347 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.93■□□□□ 0.62
Clcn1Q64347 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Clcn1Q64347 Gm13453-201ENSMUST00000118708 357 ntBASIC18.92■□□□□ 0.62
Clcn1Q64347 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Gm28630-201ENSMUST00000187806 498 ntBASIC18.92■□□□□ 0.62
Clcn1Q64347 Gm18766-201ENSMUST00000189811 808 ntBASIC18.92■□□□□ 0.62
Clcn1Q64347 Gm43438-201ENSMUST00000198133 379 ntBASIC18.92■□□□□ 0.62
Clcn1Q64347 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Clcn1Q64347 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.92■□□□□ 0.62
Clcn1Q64347 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Clcn1Q64347 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Clcn1Q64347 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.92■□□□□ 0.62
Clcn1Q64347 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn1Q64347 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Clcn1Q64347 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Clcn1Q64347 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Clcn1Q64347 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Clcn1Q64347 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.91■□□□□ 0.62
Clcn1Q64347 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.91■□□□□ 0.62
Clcn1Q64347 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Clcn1Q64347 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn1Q64347 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.9■□□□□ 0.62
Clcn1Q64347 Mir8102-201ENSMUST00000184148 139 ntBASIC18.9■□□□□ 0.62
Clcn1Q64347 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.9■□□□□ 0.62
Clcn1Q64347 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn1Q64347 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
Clcn1Q64347 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Clcn1Q64347 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Clcn1Q64347 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms