Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Commd3Q63829 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Commd3Q63829 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Commd3Q63829 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Commd3Q63829 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.5□□□□□ -0.41
Commd3Q63829 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Commd3Q63829 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Commd3Q63829 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.49□□□□□ -0.41
Commd3Q63829 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Commd3Q63829 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.49□□□□□ -0.41
Commd3Q63829 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.49□□□□□ -0.41
Commd3Q63829 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Commd3Q63829 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Commd3Q63829 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Commd3Q63829 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Commd3Q63829 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Commd3Q63829 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Commd3Q63829 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Commd3Q63829 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.48□□□□□ -0.41
Commd3Q63829 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Commd3Q63829 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Commd3Q63829 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.48□□□□□ -0.41
Commd3Q63829 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.48□□□□□ -0.41
Commd3Q63829 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.48□□□□□ -0.41
Commd3Q63829 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.48□□□□□ -0.41
Commd3Q63829 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.48□□□□□ -0.41
Commd3Q63829 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.48□□□□□ -0.41
Commd3Q63829 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Commd3Q63829 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Commd3Q63829 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Commd3Q63829 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Commd3Q63829 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Commd3Q63829 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Commd3Q63829 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Commd3Q63829 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Commd3Q63829 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms