Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.38■□□□□ 0.37
Scn9aQ62205 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Gm27892-201ENSMUST00000185017 106 ntBASIC17.38■□□□□ 0.37
Scn9aQ62205 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.38■□□□□ 0.37
Scn9aQ62205 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.38■□□□□ 0.37
Scn9aQ62205 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scn9aQ62205 BC001981-202ENSMUST00000191393 1545 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scn9aQ62205 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn9aQ62205 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Scn9aQ62205 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn9aQ62205 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.37■□□□□ 0.37
Scn9aQ62205 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn9aQ62205 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Gm12742-201ENSMUST00000117326 410 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 Gm13226-201ENSMUST00000117838 404 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn9aQ62205 AA619741-201ENSMUST00000195095 646 ntBASIC17.37■□□□□ 0.37
Scn9aQ62205 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scn9aQ62205 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.36■□□□□ 0.37
Scn9aQ62205 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scn9aQ62205 Mir1247-201ENSMUST00000116706 82 ntBASIC17.36■□□□□ 0.37
Scn9aQ62205 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.36■□□□□ 0.37
Scn9aQ62205 Prob1-201ENSMUST00000097619 3021 ntBASIC17.36■□□□□ 0.37
Scn9aQ62205 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn9aQ62205 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.35■□□□□ 0.37
Scn9aQ62205 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Gm12585-201ENSMUST00000117307 290 ntBASIC17.35■□□□□ 0.37
Scn9aQ62205 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn9aQ62205 Gm28911-201ENSMUST00000188837 117 ntBASIC17.35■□□□□ 0.37
Scn9aQ62205 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scn9aQ62205 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn9aQ62205 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn9aQ62205 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn9aQ62205 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.34■□□□□ 0.37
Scn9aQ62205 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.34■□□□□ 0.37
Scn9aQ62205 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.34■□□□□ 0.37
Scn9aQ62205 Gm33320-201ENSMUST00000192232 530 ntBASIC17.34■□□□□ 0.37
Scn9aQ62205 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn9aQ62205 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms