Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Ecm1Q61508 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.49■□□□□ 0.23
Ecm1Q61508 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.49■□□□□ 0.23
Ecm1Q61508 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.49■□□□□ 0.23
Ecm1Q61508 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ecm1Q61508 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.49■□□□□ 0.23
Ecm1Q61508 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ecm1Q61508 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Ecm1Q61508 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ecm1Q61508 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ecm1Q61508 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Gm8749-201ENSMUST00000117737 331 ntBASIC16.48■□□□□ 0.23
Ecm1Q61508 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.48■□□□□ 0.23
Ecm1Q61508 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Gm3436-201ENSMUST00000179930 840 ntBASIC16.48■□□□□ 0.23
Ecm1Q61508 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.48■□□□□ 0.23
Ecm1Q61508 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.48■□□□□ 0.23
Ecm1Q61508 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ecm1Q61508 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ecm1Q61508 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.47■□□□□ 0.23
Ecm1Q61508 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Gm14928-201ENSMUST00000120198 477 ntBASIC16.47■□□□□ 0.23
Ecm1Q61508 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.47■□□□□ 0.23
Ecm1Q61508 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.47■□□□□ 0.23
Ecm1Q61508 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.47■□□□□ 0.23
Ecm1Q61508 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.47■□□□□ 0.23
Ecm1Q61508 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ecm1Q61508 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
Ecm1Q61508 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ecm1Q61508 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ecm1Q61508 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ecm1Q61508 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ecm1Q61508 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ecm1Q61508 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ecm1Q61508 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ecm1Q61508 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ecm1Q61508 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.46■□□□□ 0.23
Ecm1Q61508 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms