Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccne1Q61457 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.39■□□□□ 0.69
Ccne1Q61457 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.39■□□□□ 0.69
Ccne1Q61457 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.39■□□□□ 0.69
Ccne1Q61457 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Ccne1Q61457 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccne1Q61457 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccne1Q61457 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Gm7488-201ENSMUST00000117148 684 ntBASIC19.38■□□□□ 0.69
Ccne1Q61457 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Ccne1Q61457 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccne1Q61457 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccne1Q61457 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccne1Q61457 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.38■□□□□ 0.69
Ccne1Q61457 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccne1Q61457 Syt7-205ENSMUST00000224135 1557 ntBASIC19.38■□□□□ 0.69
Ccne1Q61457 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccne1Q61457 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ccne1Q61457 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccne1Q61457 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccne1Q61457 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.37■□□□□ 0.69
Ccne1Q61457 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccne1Q61457 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Ccne1Q61457 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccne1Q61457 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccne1Q61457 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccne1Q61457 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Gm13464-201ENSMUST00000119418 935 ntBASIC19.37■□□□□ 0.69
Ccne1Q61457 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.37■□□□□ 0.69
Ccne1Q61457 Gm27838-201ENSMUST00000184829 128 ntBASIC19.37■□□□□ 0.69
Ccne1Q61457 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.37■□□□□ 0.69
Ccne1Q61457 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccne1Q61457 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.37■□□□□ 0.69
Ccne1Q61457 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccne1Q61457 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.36■□□□□ 0.69
Ccne1Q61457 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccne1Q61457 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccne1Q61457 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.36■□□□□ 0.69
Ccne1Q61457 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccne1Q61457 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccne1Q61457 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ccne1Q61457 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccne1Q61457 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccne1Q61457 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccne1Q61457 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms