Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Gm3786-201ENSMUST00000202659 378 ntBASIC17.27■□□□□ 0.36
Foxd1Q61345 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.27■□□□□ 0.36
Foxd1Q61345 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd1Q61345 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd1Q61345 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd1Q61345 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd1Q61345 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd1Q61345 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxd1Q61345 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Foxd1Q61345 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Foxd1Q61345 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Foxd1Q61345 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Foxd1Q61345 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxd1Q61345 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.25■□□□□ 0.35
Foxd1Q61345 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.25■□□□□ 0.35
Foxd1Q61345 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.25■□□□□ 0.35
Foxd1Q61345 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.25■□□□□ 0.35
Foxd1Q61345 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.25■□□□□ 0.35
Foxd1Q61345 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxd1Q61345 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Foxd1Q61345 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.24■□□□□ 0.35
Foxd1Q61345 Gm17420-201ENSMUST00000164753 153 ntBASIC17.24■□□□□ 0.35
Foxd1Q61345 Gm6218-201ENSMUST00000219812 628 ntBASIC17.24■□□□□ 0.35
Foxd1Q61345 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Gm10478-201ENSMUST00000084451 396 ntBASIC17.24■□□□□ 0.35
Foxd1Q61345 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.24■□□□□ 0.35
Foxd1Q61345 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Foxd1Q61345 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Foxd1Q61345 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Foxd1Q61345 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Foxd1Q61345 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.24■□□□□ 0.35
Foxd1Q61345 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxd1Q61345 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxd1Q61345 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms