Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.6■□□□□ 0.57
Irf9Q61179 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf9Q61179 Gm9824-201ENSMUST00000178707 561 ntBASIC18.6■□□□□ 0.57
Irf9Q61179 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf9Q61179 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.6■□□□□ 0.57
Irf9Q61179 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Irf9Q61179 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Irf9Q61179 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.6■□□□□ 0.57
Irf9Q61179 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Irf9Q61179 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Irf9Q61179 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Irf9Q61179 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Gm15693-201ENSMUST00000120470 637 ntBASIC18.59■□□□□ 0.57
Irf9Q61179 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.59■□□□□ 0.57
Irf9Q61179 Gm27430-201ENSMUST00000184585 107 ntBASIC18.59■□□□□ 0.57
Irf9Q61179 Gm44333-201ENSMUST00000197168 107 ntBASIC18.59■□□□□ 0.57
Irf9Q61179 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.59■□□□□ 0.57
Irf9Q61179 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Irf9Q61179 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Irf9Q61179 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Irf9Q61179 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Irf9Q61179 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf9Q61179 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Irf9Q61179 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf9Q61179 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf9Q61179 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf9Q61179 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Irf9Q61179 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Irf9Q61179 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Irf9Q61179 Gm29541-201ENSMUST00000191351 678 ntBASIC18.58■□□□□ 0.56
Irf9Q61179 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.58■□□□□ 0.56
Irf9Q61179 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf9Q61179 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf9Q61179 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.58■□□□□ 0.56
Irf9Q61179 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf9Q61179 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf9Q61179 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf9Q61179 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf9Q61179 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.57■□□□□ 0.56
Irf9Q61179 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.57■□□□□ 0.56
Irf9Q61179 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Irf9Q61179 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Irf9Q61179 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.57■□□□□ 0.56
Irf9Q61179 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.57■□□□□ 0.56
Irf9Q61179 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Gm13464-201ENSMUST00000119418 935 ntBASIC18.57■□□□□ 0.56
Irf9Q61179 Gm5479-201ENSMUST00000160578 435 ntBASIC18.57■□□□□ 0.56
Irf9Q61179 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf9Q61179 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.57■□□□□ 0.56
Irf9Q61179 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.56■□□□□ 0.56
Irf9Q61179 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Irf9Q61179 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Gm6415-201ENSMUST00000118488 348 ntBASIC18.56■□□□□ 0.56
Irf9Q61179 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.56■□□□□ 0.56
Irf9Q61179 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.56■□□□□ 0.56
Irf9Q61179 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf9Q61179 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Irf9Q61179 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf9Q61179 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf9Q61179 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf9Q61179 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms