Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ripk1Q60855 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.14□□□□□ -0.15
Ripk1Q60855 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Ripk1Q60855 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.14□□□□□ -0.15
Ripk1Q60855 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Ripk1Q60855 Gm7787-201ENSMUST00000216858 688 ntBASIC14.14□□□□□ -0.15
Ripk1Q60855 AV026068-213ENSMUST00000223675 1171 ntBASIC14.14□□□□□ -0.15
Ripk1Q60855 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Celf4-206ENSMUST00000224553 1729 ntBASIC14.13□□□□□ -0.15
Ripk1Q60855 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Gm27741-201ENSMUST00000185060 237 ntBASIC14.13□□□□□ -0.15
Ripk1Q60855 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ripk1Q60855 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ripk1Q60855 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.12□□□□□ -0.15
Ripk1Q60855 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.12□□□□□ -0.15
Ripk1Q60855 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.12□□□□□ -0.15
Ripk1Q60855 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.12□□□□□ -0.15
Ripk1Q60855 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ripk1Q60855 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ripk1Q60855 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ripk1Q60855 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms