Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Gm5177-201ENSMUST00000183092 997 ntBASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp13a4Q5XF90 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp13a4Q5XF90 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Carlr-201ENSMUST00000181515 2574 ntBASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Gm16198-201ENSMUST00000118766 670 ntBASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Gm12260-201ENSMUST00000122447 411 ntBASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Atp13a4Q5XF90 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms