Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm13223-201ENSMUST00000118609 747 ntBASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm25144-201ENSMUST00000179561 110 ntBASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm25352-201ENSMUST00000179815 110 ntBASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm6888-201ENSMUST00000221983 706 ntBASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-2Q5R1I4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 App-207ENSMUST00000227737 2827 ntBASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm27306-201ENSMUST00000183970 107 ntBASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm27989-201ENSMUST00000184721 107 ntBASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-2Q5R1I4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms