Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Gm13365-201ENSMUST00000121188 973 ntBASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Rprl2-201ENSMUST00000157150 290 ntBASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-4Q5R1I0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Asic1-205ENSMUST00000228185 1818 ntBASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms