Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Ap5m1-205ENSMUST00000227431 3757 ntBASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Gm8655-201ENSMUST00000221159 852 ntBASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc27Q3V036 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Gm45003-201ENSMUST00000205875 2158 ntBASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc27Q3V036 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Gm14722-201ENSMUST00000118943 689 ntBASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Ank2-226ENSMUST00000189368 339 ntBASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc27Q3V036 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.1■□□□□ 0.65
Ccdc27Q3V036 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Gm8344-201ENSMUST00000119813 856 ntBASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Gm12644-201ENSMUST00000119935 606 ntBASIC19.09■□□□□ 0.65
Ccdc27Q3V036 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc27Q3V036 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms