Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Gm13186-201ENSMUST00000118031 316 ntBASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Gm18115-201ENSMUST00000221209 621 ntBASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cks1brtQ3UNC9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1brtQ3UNC9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Dio3-201ENSMUST00000097228 1449 ntBASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms