Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b2Q3UJB0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3b2Q3UJB0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b2Q3UJB0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sf3b2Q3UJB0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3b2Q3UJB0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.24■□□□□ 0.67
Sf3b2Q3UJB0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Gm13392-201ENSMUST00000117708 150 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Gm12390-201ENSMUST00000117897 397 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Gm42693-201ENSMUST00000196779 631 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Olfr582-201ENSMUST00000098212 960 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3b2Q3UJB0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Mir692-1-201ENSMUST00000102263 109 ntBASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3b2Q3UJB0 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Gm15678-201ENSMUST00000117573 960 ntBASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Mir3547-201ENSMUST00000175461 88 ntBASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Gm27839-201ENSMUST00000184242 106 ntBASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.21■□□□□ 0.67
Sf3b2Q3UJB0 Gm18827-201ENSMUST00000188341 790 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms