Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.8□□□□□ -0.36
Fndc4Q3TR08 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Gm9103-201ENSMUST00000119371 405 ntBASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fndc4Q3TR08 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fndc4Q3TR08 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.78□□□□□ -0.36
Fndc4Q3TR08 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms