Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Prkcz2-201ENSMUST00000206136 1756 ntBASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Gm21769-201ENSMUST00000211922 111 ntBASIC7.82□□□□□ -1.16
Ush2AQ2QI47 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Gm23200-201ENSMUST00000104379 132 ntBASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ush2AQ2QI47 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm13689-201ENSMUST00000119360 685 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm14665-201ENSMUST00000122294 557 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm5637-201ENSMUST00000153890 1119 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 AC125486.1-201ENSMUST00000218701 320 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm38037-201ENSMUST00000192600 1624 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm12217-201ENSMUST00000118858 696 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm8194-201ENSMUST00000159783 859 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm44100-201ENSMUST00000204329 436 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm19078-201ENSMUST00000206311 727 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Gm18212-201ENSMUST00000211678 889 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 AC121804.3-201ENSMUST00000223420 295 ntBASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ush2AQ2QI47 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Gm9083-201ENSMUST00000120423 819 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Mir6927-201ENSMUST00000184494 71 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Gm7046-201ENSMUST00000221351 977 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 CU062626.3-201ENSMUST00000225522 1411 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Gm16397-201ENSMUST00000122201 494 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms