Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Thumpd3P97770 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Gm7506-201ENSMUST00000207758 815 ntBASIC15.25■□□□□ 0.03
Thumpd3P97770 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.25■□□□□ 0.03
Thumpd3P97770 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Thumpd3P97770 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Thumpd3P97770 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Thumpd3P97770 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Thumpd3P97770 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
Thumpd3P97770 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.24■□□□□ 0.03
Thumpd3P97770 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Thumpd3P97770 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.24■□□□□ 0.03
Thumpd3P97770 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.24■□□□□ 0.03
Thumpd3P97770 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Thumpd3P97770 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Thumpd3P97770 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Thumpd3P97770 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.23■□□□□ 0.03
Thumpd3P97770 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd3P97770 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Thumpd3P97770 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Thumpd3P97770 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Thumpd3P97770 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Thumpd3P97770 Gm10060-201ENSMUST00000212002 111 ntBASIC15.23■□□□□ 0.03
Thumpd3P97770 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.23■□□□□ 0.03
Thumpd3P97770 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms