Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.8□□□□□ -0.2
Cacna1aP97445 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.8□□□□□ -0.2
Cacna1aP97445 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Cacna1aP97445 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm11425-201ENSMUST00000119608 498 ntBASIC13.8□□□□□ -0.2
Cacna1aP97445 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm38225-201ENSMUST00000194001 393 ntBASIC13.8□□□□□ -0.2
Cacna1aP97445 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.8□□□□□ -0.2
Cacna1aP97445 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Gm9396-201ENSMUST00000076703 567 ntBASIC13.8□□□□□ -0.2
Cacna1aP97445 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cacna1aP97445 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cacna1aP97445 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gm29667-201ENSMUST00000190817 490 ntBASIC13.79□□□□□ -0.2
Cacna1aP97445 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.79□□□□□ -0.2
Cacna1aP97445 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cacna1aP97445 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.78□□□□□ -0.2
Cacna1aP97445 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm3786-201ENSMUST00000202659 378 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm6218-201ENSMUST00000219812 628 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Shd-206ENSMUST00000225145 998 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm12859-201ENSMUST00000117834 427 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms