Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.73■□□□□ 0.59
Nkx2-3P97334 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.73■□□□□ 0.59
Nkx2-3P97334 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkx2-3P97334 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Gm22189-201ENSMUST00000103822 86 ntBASIC18.72■□□□□ 0.59
Nkx2-3P97334 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Gm14928-201ENSMUST00000120198 477 ntBASIC18.72■□□□□ 0.59
Nkx2-3P97334 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.72■□□□□ 0.59
Nkx2-3P97334 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-3P97334 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Gm6222-201ENSMUST00000120787 396 ntBASIC18.71■□□□□ 0.59
Nkx2-3P97334 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.71■□□□□ 0.59
Nkx2-3P97334 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nkx2-3P97334 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx2-3P97334 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Gm12859-201ENSMUST00000117834 427 ntBASIC18.7■□□□□ 0.58
Nkx2-3P97334 Gm14042-201ENSMUST00000120139 833 ntBASIC18.7■□□□□ 0.58
Nkx2-3P97334 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.7■□□□□ 0.58
Nkx2-3P97334 Gm7653-201ENSMUST00000214567 508 ntBASIC18.7■□□□□ 0.58
Nkx2-3P97334 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-3P97334 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms