Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43bP86448 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43bP86448 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43bP86448 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43bP86448 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43bP86448 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trim43bP86448 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim43bP86448 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44357-201ENSMUST00000195897 142 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm19658-201ENSMUST00000196231 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44367-201ENSMUST00000196836 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44350-201ENSMUST00000197197 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44390-201ENSMUST00000197533 144 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44313-201ENSMUST00000198018 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44486-201ENSMUST00000198508 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44314-201ENSMUST00000199263 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44394-201ENSMUST00000199558 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44484-201ENSMUST00000199873 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44466-201ENSMUST00000200264 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm44359-201ENSMUST00000200671 138 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim43bP86448 Gm7506-201ENSMUST00000207758 815 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.41■□□□□ 0.06
Trim43bP86448 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.41■□□□□ 0.06
Trim43bP86448 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trim43bP86448 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim43bP86448 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43bP86448 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.4■□□□□ 0.06
Trim43bP86448 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43bP86448 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim43bP86448 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Gm2651-201ENSMUST00000203560 838 ntBASIC15.4■□□□□ 0.06
Trim43bP86448 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim43bP86448 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43bP86448 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43bP86448 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43bP86448 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trim43bP86448 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Trim43bP86448 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim43bP86448 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim43bP86448 Gm7230-201ENSMUST00000173026 815 ntBASIC15.39■□□□□ 0.05
Trim43bP86448 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim43bP86448 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Trim43bP86448 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.39■□□□□ 0.05
Trim43bP86448 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim43bP86448 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim43bP86448 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms