Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.35□□□□□ -0.27
SgcbP82349 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.35□□□□□ -0.27
SgcbP82349 Gm27301-201ENSMUST00000184012 127 ntBASIC13.35□□□□□ -0.27
SgcbP82349 Gm37935-201ENSMUST00000192012 982 ntBASIC13.35□□□□□ -0.27
SgcbP82349 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.35□□□□□ -0.27
SgcbP82349 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.35□□□□□ -0.27
SgcbP82349 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SgcbP82349 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.34□□□□□ -0.27
SgcbP82349 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.34□□□□□ -0.27
SgcbP82349 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.34□□□□□ -0.27
SgcbP82349 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.34□□□□□ -0.27
SgcbP82349 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.34□□□□□ -0.27
SgcbP82349 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.34□□□□□ -0.27
SgcbP82349 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.34□□□□□ -0.27
SgcbP82349 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.34□□□□□ -0.27
SgcbP82349 Thap2-203ENSMUST00000218989 527 ntBASIC13.34□□□□□ -0.27
SgcbP82349 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SgcbP82349 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.34□□□□□ -0.27
SgcbP82349 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.34□□□□□ -0.27
SgcbP82349 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcbP82349 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcbP82349 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcbP82349 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcbP82349 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcbP82349 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcbP82349 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
SgcbP82349 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcbP82349 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.33□□□□□ -0.28
SgcbP82349 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SgcbP82349 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SgcbP82349 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Gm5177-201ENSMUST00000183092 997 ntBASIC13.33□□□□□ -0.28
SgcbP82349 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.33□□□□□ -0.28
SgcbP82349 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.33□□□□□ -0.28
SgcbP82349 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.33□□□□□ -0.28
SgcbP82349 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.33□□□□□ -0.28
SgcbP82349 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.33□□□□□ -0.28
SgcbP82349 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SgcbP82349 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SgcbP82349 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms