Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Stra8P70278 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC20.71■□□□□ 0.91
Stra8P70278 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Stra8P70278 Gm4459-201ENSMUST00000118750 468 ntBASIC20.71■□□□□ 0.91
Stra8P70278 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.71■□□□□ 0.91
Stra8P70278 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.71■□□□□ 0.91
Stra8P70278 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Birc2-201ENSMUST00000054878 378 ntBASIC20.71■□□□□ 0.91
Stra8P70278 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Sorbs3-204ENSMUST00000227929 2460 ntBASIC20.71■□□□□ 0.91
Stra8P70278 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Stra8P70278 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Stra8P70278 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stra8P70278 Ap5m1-205ENSMUST00000227431 3757 ntBASIC20.7■□□□□ 0.9
Stra8P70278 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Stra8P70278 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Stra8P70278 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.7■□□□□ 0.9
Stra8P70278 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Stra8P70278 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Stra8P70278 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stra8P70278 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.69■□□□□ 0.9
Stra8P70278 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.69■□□□□ 0.9
Stra8P70278 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Stra8P70278 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Grk6-207ENSMUST00000225925 2769 ntBASIC20.69■□□□□ 0.9
Stra8P70278 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stra8P70278 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stra8P70278 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.68■□□□□ 0.9
Stra8P70278 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC20.68■□□□□ 0.9
Stra8P70278 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Stra8P70278 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.67■□□□□ 0.9
Stra8P70278 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.67■□□□□ 0.9
Stra8P70278 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Gm27459-201ENSMUST00000184860 107 ntBASIC20.67■□□□□ 0.9
Stra8P70278 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Stra8P70278 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Stra8P70278 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stra8P70278 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Stra8P70278 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stra8P70278 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stra8P70278 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms