Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.3■□□□□ 0.04
Tubgcp3P58854 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.3■□□□□ 0.04
Tubgcp3P58854 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Tubgcp3P58854 AV026068-213ENSMUST00000223675 1171 ntBASIC15.3■□□□□ 0.04
Tubgcp3P58854 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp3P58854 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.29■□□□□ 0.04
Tubgcp3P58854 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.29■□□□□ 0.04
Tubgcp3P58854 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.29■□□□□ 0.04
Tubgcp3P58854 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp3P58854 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.28■□□□□ 0.04
Tubgcp3P58854 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.28■□□□□ 0.04
Tubgcp3P58854 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.28■□□□□ 0.04
Tubgcp3P58854 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubgcp3P58854 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms