Protein–RNA interactions for Protein: P57780

Actn4, Alpha-actinin-4, mousemouse

Known RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn4P57780 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Actn4P57780 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Actn4P57780 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Gm13333-201ENSMUST00000119424 781 ntBASIC16.28■□□□□ 0.2
Actn4P57780 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.28■□□□□ 0.2
Actn4P57780 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.28■□□□□ 0.2
Actn4P57780 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.28■□□□□ 0.2
Actn4P57780 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
Actn4P57780 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Actn4P57780 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.27■□□□□ 0.2
Actn4P57780 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.27■□□□□ 0.2
Actn4P57780 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.27■□□□□ 0.2
Actn4P57780 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.27■□□□□ 0.2
Actn4P57780 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.27■□□□□ 0.2
Actn4P57780 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Actn4P57780 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.27■□□□□ 0.2
Actn4P57780 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Actn4P57780 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.27■□□□□ 0.19
Actn4P57780 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Actn4P57780 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.26■□□□□ 0.19
Actn4P57780 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Actn4P57780 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Actn4P57780 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Gm44357-201ENSMUST00000195897 142 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm19658-201ENSMUST00000196231 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44367-201ENSMUST00000196836 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44350-201ENSMUST00000197197 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44390-201ENSMUST00000197533 144 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44313-201ENSMUST00000198018 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44486-201ENSMUST00000198508 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44314-201ENSMUST00000199263 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44394-201ENSMUST00000199558 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44484-201ENSMUST00000199873 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44466-201ENSMUST00000200264 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Gm44359-201ENSMUST00000200671 138 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.26■□□□□ 0.19
Actn4P57780 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Actn4P57780 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Actn4P57780 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Actn4P57780 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Actn4P57780 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Actn4P57780 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Actn4P57780 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Actn4P57780 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Actn4P57780 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms